Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase family protein | RCA23_RS14185 | Not Available | Positive | 2942344 - 2943621 | 45776.5 |
| type 1 glutamine amidotransferase | RCA23_RS14190 | Not Available | Positive | 2943682 - 2944383 | 25769.3 |
| glutamine synthetase family protein | RCA23_RS14195 | Not Available | Positive | 2944380 - 2945732 | 50283.4 |
| nad(p)/fad-dependent oxidoreductase | RCA23_RS14200 | Not Available | Positive | 2945725 - 2947029 | 46720.4 |
| hypothetical protein | RCA23_RS16890 | Not Available | Positive | 2947026 - 2947160 | 4667.52 |
| aminotransferase | RCA23_RS14205 | Not Available | Positive | 2947227 - 2948594 | 49770.2 |
| polyhydroxyalkanoate synthesis repressor phar | RCA23_RS14210 | Not Available | Negative | 2948632 - 2949180 | 20240.2 |
| hypothetical protein | RCA23_RS14215 | Not Available | Negative | 2949338 - 2949760 | 14463.4 |
| pha/phb synthase family protein | RCA23_RS14220 | Not Available | Negative | 2949850 - 2951592 | 64810.9 |
| polyhydroxyalkanoate depolymerase | RCA23_RS14225 | Not Available | Positive | 2951693 - 2952952 | 46673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
