Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | RCA23_RS14135 | Not Available | Negative | 2933779 - 2935071 | 46442.5 |
| preprotein translocase subunit secg | RCA23_RS14140 | Not Available | Positive | 2935313 - 2935666 | 11663.4 |
| ctp synthase | RCA23_RS14145 | Not Available | Positive | 2935819 - 2937462 | 60857.4 |
| duf1330 domain-containing protein | RCA23_RS14150 | Not Available | Positive | 2937481 - 2937774 | 10560.6 |
| terb family tellurite resistance protein | RCA23_RS14155 | Not Available | Positive | 2937808 - 2938227 | 15209.9 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | RCA23_RS14160 | Not Available | Positive | 2938232 - 2938948 | 25805.9 |
| abc transporter atp-binding protein | RCA23_RS14165 | Not Available | Positive | 2939027 - 2939800 | 28120.0 |
| transporter substrate-binding domain-containing protein | RCA23_RS14170 | Not Available | Positive | 2939834 - 2940547 | 25122.4 |
| abc transporter permease | RCA23_RS14175 | Not Available | Positive | 2940681 - 2941547 | 32244.8 |
| abc transporter permease | RCA23_RS14180 | Not Available | Positive | 2941544 - 2942347 | 30478.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
