Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | RCA23_RS14085 | Not Available | Negative | 2923781 - 2924662 | 32549.0 |
| ftsh protease activity modulator hflk | RCA23_RS14090 | Not Available | Negative | 2924668 - 2925849 | 42245.5 |
| glutathione-disulfide reductase | RCA23_RS14095 | Not Available | Negative | 2925913 - 2927271 | 48354.3 |
| ribose-5-phosphate isomerase rpia | RCA23_RS14100 | Not Available | Negative | 2927336 - 2928055 | 25351.5 |
| l-serine ammonia-lyase | RCA23_RS14105 | Not Available | Positive | 2928419 - 2929792 | 47788.5 |
| dmt family transporter | RCA23_RS14110 | Not Available | Positive | 2929823 - 2930707 | 31634.2 |
| thiamine diphosphokinase | RCA23_RS14115 | Not Available | Negative | 2930672 - 2931346 | 23668.4 |
| hypothetical protein | RCA23_RS14120 | Not Available | Positive | 2931480 - 2931917 | 15544.6 |
| hint domain-containing protein | RCA23_RS16105 | Not Available | Positive | 2932378 - 2933484 | 40189.9 |
| duf2842 domain-containing protein | RCA23_RS14130 | Not Available | Negative | 2933552 - 2933779 | 8347.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
