Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane-spanning protein ycib | RCA23_RS14035 | Not Available | Negative | 2913531 - 2914130 | 22516.3 |
| dmt family transporter | RCA23_RS14040 | Not Available | Negative | 2914146 - 2915048 | 32540.8 |
| signal recognition particle-docking protein ftsy | RCA23_RS14045 | Not Available | Negative | 2915045 - 2916226 | 41536.8 |
| nad(p)h-dependent oxidoreductase subunit e | RCA23_RS14050 | Not Available | Negative | 2916323 - 2918008 | 60703.5 |
| exodeoxyribonuclease vii large subunit | RCA23_RS14055 | Not Available | Negative | 2918133 - 2919686 | 56119.9 |
| phosphoribosylamine--glycine ligase | RCA23_RS14060 | Not Available | Positive | 2919757 - 2921019 | 43997.7 |
| 2fe-2s iron-sulfur cluster-binding protein | RCA23_RS14065 | Not Available | Negative | 2921075 - 2921398 | 11583.8 |
| ob-fold nucleic acid binding domain-containing protein | RCA23_RS14070 | Not Available | Positive | 2921520 - 2921894 | 13771.8 |
| do family serine endopeptidase | RCA23_RS14075 | Not Available | Negative | 2921956 - 2923431 | 51918.2 |
| duf2065 family protein | RCA23_RS14080 | Not Available | Negative | 2923599 - 2923784 | 6423.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
