Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | RCA23_RS13935 | Not Available | Negative | 2895316 - 2895693 | 12745.4 |
| 50s ribosomal protein l10 | RCA23_RS13940 | Not Available | Negative | 2895762 - 2896274 | 17388.2 |
| 50s ribosomal protein l1 | RCA23_RS13945 | Not Available | Negative | 2896648 - 2897346 | 24176.5 |
| 50s ribosomal protein l11 | RCA23_RS13950 | Not Available | Negative | 2897348 - 2897797 | 15852.4 |
| transcription termination/antitermination protein nusg | RCA23_RS13955 | Not Available | Negative | 2897928 - 2898461 | 20269.2 |
| preprotein translocase subunit sece | RCA23_RS13960 | Not Available | Negative | 2898627 - 2898821 | 7193.15 |
| hypothetical protein | RCA23_RS13965 | Not Available | Negative | 2898895 - 2899527 | 23731.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2899898 - 2900012 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2900131 - 2903044 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2903485 - 2903560 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
