Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter transmembrane domain-containing protein | RCA23_RS13885 | Not Available | Negative | 2878422 - 2880212 | 63778.7 |
| spore coat u domain-containing protein | RCA23_RS13890 | Not Available | Positive | 2880650 - 2881150 | 16877.6 |
| molecular chaperone | RCA23_RS13895 | Not Available | Positive | 2881370 - 2882092 | 26329.6 |
| hypothetical protein | RCA23_RS13900 | Not Available | Positive | 2882198 - 2884033 | 66468.1 |
| fimbria/pilus outer membrane usher protein | RCA23_RS13905 | Not Available | Positive | 2884043 - 2884906 | 31280.6 |
| hypothetical protein | RCA23_RS13910 | Not Available | Positive | 2884866 - 2885357 | 16972.3 |
| Trna-gly | Not Available | Not Available | Positive | 2885429 - 2885502 | Not Available |
| dmt family transporter | RCA23_RS13920 | Not Available | Negative | 2885598 - 2886473 | 31460.7 |
| dna-directed rna polymerase subunit beta' | RCA23_RS13925 | Not Available | Negative | 2886601 - 2890851 | 156915.0 |
| dna-directed rna polymerase subunit beta | RCA23_RS13930 | Not Available | Negative | 2890911 - 2895044 | 152991.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
