Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16150 | Not Available | Negative | 290762 - 290938 | 6501.52 |
| azlc family abc transporter permease | RCA23_RS16895 | Not Available | Positive | 290989 - 291273 | 9860.48 |
| hypothetical protein | RCA23_RS16900 | Not Available | Positive | 291289 - 291687 | 14100.8 |
| transketolase | RCA23_RS01340 | Not Available | Negative | 291886 - 293832 | 70313.7 |
| nad(p)h-dependent oxidoreductase | RCA23_RS01345 | Not Available | Negative | 293834 - 295174 | 47879.8 |
| transketolase | RCA23_RS01350 | Not Available | Positive | 295374 - 296207 | 30433.0 |
| transketolase family protein | RCA23_RS01355 | Not Available | Positive | 296204 - 297247 | 36957.7 |
| nad(p)-dependent oxidoreductase | RCA23_RS16635 | Not Available | Positive | 297249 - 297809 | 18838.8 |
| nad-binding protein | RCA23_RS16640 | Not Available | Positive | 297791 - 298171 | 13059.6 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS01365 | Not Available | Positive | 298168 - 298920 | 25812.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
