Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | RCA23_RS13735 | Not Available | Positive | 2843720 - 2844733 | 35727.0 |
| ester cyclase | RCA23_RS13740 | Not Available | Positive | 2844730 - 2845731 | 37084.6 |
| cupin domain-containing protein | RCA23_RS13745 | Not Available | Positive | 2845728 - 2846693 | 34744.1 |
| cobalamin-independent methionine synthase ii family protein | RCA23_RS13750 | Not Available | Positive | 2846772 - 2847896 | 40877.2 |
| alpha/beta fold hydrolase | RCA23_RS13755 | Not Available | Positive | 2847893 - 2848561 | 24871.5 |
| rraa family protein | RCA23_RS13760 | Not Available | Positive | 2848567 - 2849259 | 24691.4 |
| nad(p)-dependent oxidoreductase | RCA23_RS13765 | Not Available | Positive | 2850269 - 2851174 | 32106.4 |
| dihydroxy-acid dehydratase | RCA23_RS13770 | Not Available | Positive | 2851171 - 2852874 | 60679.5 |
| nad(p)h-dependent oxidoreductase | RCA23_RS13775 | Not Available | Positive | 2852884 - 2854224 | 47764.4 |
| gmc family oxidoreductase | RCA23_RS13780 | Not Available | Positive | 2854264 - 2855901 | 59643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
