Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hggxstg domain-containing protein | RCA23_RS13680 | Not Available | Negative | 2831898 - 2832257 | 13245.2 |
| ester cyclase | RCA23_RS13685 | Not Available | Negative | 2832826 - 2833914 | 40699.3 |
| ester cyclase | RCA23_RS13695 | Not Available | Negative | 2834964 - 2835971 | 37513.0 |
| carbohydrate abc transporter permease | RCA23_RS13700 | Not Available | Negative | 2835975 - 2836859 | 32629.1 |
| abc transporter permease subunit | RCA23_RS13705 | Not Available | Negative | 2836863 - 2837885 | 37718.4 |
| abc transporter substrate-binding protein | RCA23_RS13710 | Not Available | Negative | 2837985 - 2839229 | 43135.6 |
| abc transporter atp-binding protein | RCA23_RS13715 | Not Available | Positive | 2839509 - 2840555 | 37953.7 |
| histidinol dehydrogenase | RCA23_RS13720 | Not Available | Positive | 2840606 - 2841937 | 48116.6 |
| ester cyclase | RCA23_RS13725 | Not Available | Positive | 2841934 - 2842959 | 38101.0 |
| sdr family oxidoreductase | RCA23_RS13730 | Not Available | Positive | 2842956 - 2843720 | 26440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
