Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase-related protein | RCA23_RS13410 | Not Available | Negative | 2780740 - 2781471 | 27443.3 |
| tripartite tricarboxylate transporter substrate-binding protein | RCA23_RS13415 | Not Available | Negative | 2781536 - 2782477 | 32491.8 |
| tripartite tricarboxylate transporter permease | RCA23_RS13420 | Not Available | Negative | 2782504 - 2783997 | 53129.7 |
| hypothetical protein | RCA23_RS13425 | Not Available | Negative | 2784008 - 2784742 | 28251.0 |
| aldehyde dehydrogenase family protein | RCA23_RS13430 | Not Available | Negative | 2784739 - 2786211 | 51871.6 |
| hypothetical protein | RCA23_RS13435 | Not Available | Positive | 2787515 - 2787901 | 14478.4 |
| hypothetical protein | RCA23_RS13440 | Not Available | Positive | 2787903 - 2788388 | 17591.5 |
| yjbh domain-containing protein | RCA23_RS16320 | Not Available | Negative | 2788618 - 2788725 | 4270.39 |
| glycosyltransferase family 10 domain-containing protein | RCA23_RS16095 | Not Available | Positive | 2789043 - 2790062 | 39947.7 |
| yjbh domain-containing protein | RCA23_RS13455 | Not Available | Negative | 2790138 - 2790485 | 13103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
