Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | RCA23_RS13360 | Not Available | Negative | 2767511 - 2768296 | 28319.7 |
| amidohydrolase family protein | RCA23_RS13365 | Not Available | Positive | 2768393 - 2769280 | 33333.5 |
| flavin-dependent oxidoreductase | RCA23_RS13370 | Not Available | Positive | 2769438 - 2770715 | 46188.5 |
| sulfatase-like hydrolase/transferase | RCA23_RS13375 | Not Available | Negative | 2770791 - 2772437 | 62017.1 |
| marr family winged helix-turn-helix transcriptional regulator | RCA23_RS13380 | Not Available | Negative | 2772434 - 2772940 | 19333.4 |
| taxi family trap transporter solute-binding subunit | RCA23_RS13385 | Not Available | Positive | 2773067 - 2774122 | 36545.6 |
| trap transporter fused permease subunit | RCA23_RS13390 | Not Available | Positive | 2774186 - 2776480 | 82129.8 |
| tm-1-like atp-binding domain-containing protein | RCA23_RS13395 | Not Available | Negative | 2776852 - 2778081 | 43074.7 |
| glutamine synthetase family protein | RCA23_RS13400 | Not Available | Negative | 2778236 - 2779513 | 46872.9 |
| cytochrome p450 | RCA23_RS13405 | Not Available | Negative | 2779515 - 2780750 | 46278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
