Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome segregation protein smc | RCA23_RS13260 | Not Available | Negative | 2749505 - 2752960 | 125163.0 |
| hypothetical protein | RCA23_RS13265 | Not Available | Negative | 2753145 - 2753342 | 7054.29 |
| sdr family oxidoreductase | RCA23_RS13270 | Not Available | Positive | 2753587 - 2754378 | 27204.7 |
| sulfite exporter taue/safe family protein | RCA23_RS13275 | Not Available | Positive | 2754434 - 2755204 | 27883.2 |
| 50s ribosomal protein l2 | RCA23_RS13280 | Not Available | Positive | 2755430 - 2756272 | 30462.9 |
| 30s ribosomal protein s19 | RCA23_RS13285 | Not Available | Positive | 2756276 - 2756554 | 10523.6 |
| 50s ribosomal protein l22 | RCA23_RS13290 | Not Available | Positive | 2756558 - 2756938 | 14163.3 |
| 30s ribosomal protein s3 | RCA23_RS13295 | Not Available | Positive | 2756938 - 2757657 | 26849.6 |
| 50s ribosomal protein l16 | RCA23_RS13300 | Not Available | Positive | 2757669 - 2758082 | 15626.4 |
| hypothetical protein | RCA23_RS13305 | Not Available | Negative | 2758193 - 2758384 | 6541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
