Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | RCA23_RS13210 | Not Available | Negative | 2739660 - 2740859 | 42939.0 |
| precorrin-8x methylmutase | RCA23_RS13215 | Not Available | Negative | 2740856 - 2741494 | 21928.6 |
| sirohydrochlorin chelatase | RCA23_RS13220 | Not Available | Negative | 2741541 - 2742653 | 40060.4 |
| duf6732 family protein | RCA23_RS13225 | Not Available | Negative | 2742655 - 2742864 | 7049.35 |
| fkbm family methyltransferase | RCA23_RS16085 | Not Available | Positive | 2743257 - 2744771 | 57431.0 |
| glutathione s-transferase c-terminal domain-containing protein | RCA23_RS13235 | Not Available | Positive | 2744883 - 2745842 | 37200.7 |
| duf1636 domain-containing protein | RCA23_RS13240 | Not Available | Positive | 2745920 - 2746291 | 13492.0 |
| threonine-phosphate decarboxylase | RCA23_RS13245 | Not Available | Positive | 2746291 - 2747238 | 34017.4 |
| adenosylcobinamide-phosphate synthase cbib | RCA23_RS13250 | Not Available | Positive | 2747178 - 2748140 | 34198.1 |
| peptidoglycan-binding protein | RCA23_RS13255 | Not Available | Positive | 2748180 - 2749349 | 42837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
