Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | RCA23_RS13160 | Not Available | Positive | 2731991 - 2732443 | 16447.6 |
| hypothetical protein | RCA23_RS13165 | Not Available | Positive | 2732467 - 2732703 | 8629.73 |
| methionyl-trna formyltransferase | RCA23_RS13170 | Not Available | Negative | 2732700 - 2733599 | 31782.3 |
| peptide deformylase | RCA23_RS13175 | Not Available | Negative | 2733590 - 2734084 | 18423.8 |
| peptide deformylase | RCA23_RS13180 | Not Available | Negative | 2734081 - 2734602 | 19485.9 |
| maly/patb family protein | RCA23_RS13185 | Not Available | Positive | 2734743 - 2735909 | 42913.1 |
| hypothetical protein | RCA23_RS13190 | Not Available | Negative | 2735922 - 2736272 | 13137.6 |
| precorrin-4 c(11)-methyltransferase | RCA23_RS13195 | Not Available | Negative | 2736360 - 2737133 | 27695.7 |
| precorrin-3b c(17)-methyltransferase | RCA23_RS13200 | Not Available | Negative | 2737130 - 2738971 | 63836.6 |
| precorrin-2 c(20)-methyltransferase | RCA23_RS13205 | Not Available | Negative | 2738962 - 2739663 | 24574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
