Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bspa family leucine-rich repeat surface protein | RCA23_RS16075 | Not Available | Negative | 2698459 - 2703372 | 175554.0 |
| catalase/peroxidase hpi | RCA23_RS13015 | Not Available | Positive | 2703948 - 2706137 | 79090.2 |
| hypothetical protein | RCA23_RS16080 | Not Available | Positive | 2706353 - 2707432 | 37412.8 |
| thioesterase family protein | RCA23_RS13025 | Not Available | Negative | 2707480 - 2707911 | 15930.1 |
| iron-containing alcohol dehydrogenase | RCA23_RS13030 | Not Available | Negative | 2707905 - 2709059 | 39720.5 |
| acyl-coa dehydrogenase family protein | RCA23_RS13035 | Not Available | Negative | 2709075 - 2710310 | 45741.2 |
| maoc family dehydratase | RCA23_RS13040 | Not Available | Positive | 2710364 - 2710906 | 20015.9 |
| phosphotransferase family protein | RCA23_RS13045 | Not Available | Positive | 2710903 - 2711943 | 38580.9 |
| tetr/acrr family transcriptional regulator | RCA23_RS13050 | Not Available | Positive | 2711940 - 2712548 | 22163.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RCA23_RS13055 | Not Available | Positive | 2712623 - 2714713 | 75043.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
