Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | RCA23_RS12860 | Not Available | Negative | 2670925 - 2671545 | 23354.0 |
| na+/h+ antiporter nhaa | RCA23_RS12865 | Not Available | Positive | 2671592 - 2672890 | 46784.9 |
| abc transporter atp-binding protein | RCA23_RS12870 | Not Available | Positive | 2673062 - 2673721 | 24802.5 |
| hypothetical protein | RCA23_RS12875 | Not Available | Positive | 2673699 - 2675342 | 59890.6 |
| Trna-gln | Not Available | Not Available | Positive | 2675460 - 2675534 | Not Available |
| coa-binding protein | RCA23_RS12885 | Not Available | Negative | 2675545 - 2675994 | 16509.3 |
| 2fe-2s iron-sulfur cluster-binding protein | RCA23_RS12890 | Not Available | Negative | 2675997 - 2676353 | 13196.9 |
| selenium-binding family protein | RCA23_RS12895 | Not Available | Negative | 2676350 - 2677702 | 50500.8 |
| aldehyde dehydrogenase family protein | RCA23_RS12900 | Not Available | Negative | 2677789 - 2679228 | 50980.1 |
| caib/baif coa transferase family protein | RCA23_RS12905 | Not Available | Negative | 2679296 - 2680435 | 40423.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
