Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| morn repeat-containing protein | RCA23_RS12810 | Not Available | Positive | 2659555 - 2660997 | 51479.5 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS12815 | Not Available | Negative | 2661011 - 2661772 | 27021.6 |
| 2-isopropylmalate synthase | RCA23_RS12820 | Not Available | Positive | 2661935 - 2663500 | 56653.1 |
| rod shape-determining protein | RCA23_RS12825 | Not Available | Positive | 2663641 - 2664678 | 36400.2 |
| rod shape-determining protein mrec | RCA23_RS12830 | Not Available | Positive | 2664709 - 2665593 | 32482.4 |
| hypothetical protein | RCA23_RS12835 | Not Available | Positive | 2665590 - 2666129 | 20543.1 |
| penicillin-binding protein 2 | RCA23_RS12840 | Not Available | Positive | 2666126 - 2668078 | 71006.4 |
| rod shape-determining protein roda | RCA23_RS12845 | Not Available | Positive | 2668075 - 2669226 | 42174.1 |
| glyoxylate/hydroxypyruvate reductase a | RCA23_RS12850 | Not Available | Positive | 2669223 - 2670152 | 33499.3 |
| sseb family protein | RCA23_RS12855 | Not Available | Negative | 2670162 - 2670938 | 27655.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
