Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase family protein | RCA23_RS12715 | Not Available | Positive | 2636965 - 2638131 | 41639.2 |
| dtmp kinase | RCA23_RS12720 | Not Available | Positive | 2638132 - 2638746 | 22170.4 |
| dna polymerase iii subunit delta' | RCA23_RS12725 | Not Available | Positive | 2638743 - 2639867 | 39828.1 |
| tatd family hydrolase | RCA23_RS12730 | Not Available | Positive | 2639867 - 2640652 | 28790.1 |
| mbl fold metallo-hydrolase | RCA23_RS12735 | Not Available | Positive | 2640649 - 2641437 | 28858.4 |
| aec family transporter | RCA23_RS12740 | Not Available | Positive | 2641439 - 2642368 | 32981.1 |
| nad(p)/fad-dependent oxidoreductase | RCA23_RS12745 | Not Available | Negative | 2642372 - 2643457 | 37869.4 |
| excinuclease abc subunit uvrb | RCA23_RS12750 | Not Available | Positive | 2643645 - 2645834 | 82104.6 |
| glycosyl hydrolase family 28-related protein | RCA23_RS12755 | Not Available | Negative | 2645909 - 2647699 | 64952.2 |
| hypothetical protein | RCA23_RS16925 | Not Available | Negative | 2647642 - 2648196 | 19508.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
