Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| btpa/sgcq family protein | RCA23_RS12615 | Not Available | Negative | 2613270 - 2614073 | 28760.3 |
| aldo/keto reductase | RCA23_RS12620 | Not Available | Positive | 2614166 - 2615188 | 37535.9 |
| amidohydrolase family protein | RCA23_RS12625 | Not Available | Positive | 2615185 - 2616021 | 32128.2 |
| pfkb family carbohydrate kinase | RCA23_RS12630 | Not Available | Negative | 2616009 - 2616815 | 27401.4 |
| tim barrel protein | RCA23_RS12635 | Not Available | Negative | 2616854 - 2617825 | 35055.9 |
| gntr family transcriptional regulator | RCA23_RS12640 | Not Available | Negative | 2617822 - 2618529 | 26398.8 |
| enolase c-terminal domain-like protein | RCA23_RS12645 | Not Available | Negative | 2618739 - 2620034 | 47398.6 |
| fatty acid desaturase family protein | RCA23_RS12650 | Not Available | Positive | 2620722 - 2621792 | 40473.6 |
| duf2924 domain-containing protein | RCA23_RS16065 | Not Available | Positive | 2622070 - 2622366 | 10978.4 |
| is6 family transposase | RCA23_RS12665 | Not Available | Negative | 2622369 - 2623076 | 28384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
