Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | RCA23_RS12520 | Not Available | Positive | 2593430 - 2593870 | 15769.0 |
| metal abc transporter atp-binding protein | RCA23_RS12525 | Not Available | Positive | 2593867 - 2594616 | 26718.0 |
| metal abc transporter permease | RCA23_RS12530 | Not Available | Positive | 2594616 - 2595410 | 27469.7 |
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | RCA23_RS12535 | Not Available | Positive | 2595534 - 2597435 | 69941.2 |
| hypothetical protein | RCA23_RS16575 | Not Available | Negative | 2597555 - 2597707 | 5508.06 |
| hypothetical protein | RCA23_RS16585 | Not Available | Negative | 2598104 - 2598436 | 12827.4 |
| hypothetical protein | RCA23_RS12545 | Not Available | Negative | 2598503 - 2598748 | 9212.25 |
| sdr family oxidoreductase | RCA23_RS12550 | Not Available | Positive | 2599041 - 2599844 | 29020.7 |
| creatininase family protein | RCA23_RS12555 | Not Available | Positive | 2599863 - 2600606 | 27652.2 |
| smp-30/gluconolactonase/lre family protein | RCA23_RS12560 | Not Available | Negative | 2600642 - 2601568 | 34131.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
