Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS12465 | Not Available | Negative | 2583128 - 2583418 | 10919.3 |
| aminopeptidase p family protein | RCA23_RS12470 | Not Available | Positive | 2583834 - 2585051 | 44413.3 |
| alpha/beta fold hydrolase | RCA23_RS12475 | Not Available | Negative | 2585276 - 2585998 | 26131.6 |
| abc transporter permease subunit | RCA23_RS12480 | Not Available | Negative | 2585995 - 2587548 | 56447.6 |
| glycine betaine/l-proline abc transporter atp-binding protein | RCA23_RS12485 | Not Available | Negative | 2587545 - 2588600 | 38283.8 |
| glycine betaine abc transporter substrate-binding protein | RCA23_RS12490 | Not Available | Negative | 2588670 - 2589635 | 34589.6 |
| lysr family transcriptional regulator | RCA23_RS12500 | Not Available | Positive | 2589879 - 2590763 | 33109.5 |
| d-cysteine desulfhydrase | RCA23_RS12505 | Not Available | Negative | 2590770 - 2591783 | 36131.4 |
| hypothetical protein | RCA23_RS12510 | Not Available | Positive | 2591995 - 2592351 | 13068.6 |
| zinc abc transporter substrate-binding protein | RCA23_RS12515 | Not Available | Negative | 2592375 - 2593298 | 33017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
