Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS12365 | Not Available | Negative | 2559092 - 2559706 | 22055.6 |
| atp-binding cassette domain-containing protein | RCA23_RS12370 | Not Available | Negative | 2559703 - 2560482 | 28121.3 |
| abc transporter permease | RCA23_RS12375 | Not Available | Negative | 2560479 - 2561558 | 37841.1 |
| substrate-binding domain-containing protein | RCA23_RS12380 | Not Available | Negative | 2561672 - 2562676 | 33874.1 |
| rok family transcriptional regulator | RCA23_RS12385 | Not Available | Positive | 2562858 - 2564048 | 42979.4 |
| arylesterase | RCA23_RS12390 | Not Available | Negative | 2564060 - 2564746 | 24261.0 |
| abc transporter atp-binding protein | RCA23_RS12395 | Not Available | Positive | 2564825 - 2565451 | 22107.4 |
| abc transporter permease | RCA23_RS12400 | Not Available | Positive | 2565448 - 2567970 | 89123.8 |
| glycosyltransferase family 2 protein | RCA23_RS12405 | Not Available | Positive | 2568328 - 2569251 | 33848.5 |
| aspartate aminotransferase family protein | RCA23_RS12410 | Not Available | Negative | 2569266 - 2570639 | 49314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
