Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | RCA23_RS12315 | Not Available | Negative | 2551261 - 2551467 | 7701.18 |
| tigr02466 family protein | RCA23_RS12320 | Not Available | Positive | 2551692 - 2552312 | 23253.4 |
| 50s ribosomal protein l23 | RCA23_RS12325 | Not Available | Negative | 2552407 - 2552703 | 10829.2 |
| 50s ribosomal protein l4 | RCA23_RS12330 | Not Available | Negative | 2552700 - 2553317 | 21898.7 |
| 50s ribosomal protein l3 | RCA23_RS12335 | Not Available | Negative | 2553314 - 2554045 | 25335.8 |
| 30s ribosomal protein s10 | RCA23_RS12340 | Not Available | Negative | 2554060 - 2554368 | 11492.1 |
| elongation factor tu | RCA23_RS12345 | Not Available | Negative | 2554474 - 2555649 | 42681.0 |
| elongation factor g | RCA23_RS12350 | Not Available | Negative | 2555734 - 2557851 | 77949.9 |
| 30s ribosomal protein s7 | RCA23_RS12355 | Not Available | Negative | 2557873 - 2558343 | 17903.6 |
| 30s ribosomal protein s12 | RCA23_RS12360 | Not Available | Negative | 2558356 - 2558727 | 14153.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
