Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pep-binding protein | RCA23_RS01190 | Not Available | Positive | 261491 - 263977 | 89170.9 |
| cell wall hydrolase | RCA23_RS01195 | Not Available | Positive | 264078 - 264761 | 24978.3 |
| dihydroneopterin aldolase | RCA23_RS01200 | Not Available | Positive | 264811 - 265737 | 34126.7 |
| dihydropteroate synthase | RCA23_RS01205 | Not Available | Positive | 265734 - 266720 | 34867.9 |
| eama family transporter | RCA23_RS01210 | Not Available | Negative | 266692 - 267615 | 32483.4 |
| ketol-acid reductoisomerase | RCA23_RS01215 | Not Available | Negative | 267707 - 268729 | 36921.4 |
| lrp/asnc family transcriptional regulator | RCA23_RS01220 | Not Available | Positive | 268864 - 269319 | 17011.8 |
| lrp/asnc family transcriptional regulator | RCA23_RS01225 | Not Available | Positive | 269316 - 269771 | 16838.4 |
| aminotransferase class v-fold plp-dependent enzyme | RCA23_RS01230 | Not Available | Positive | 269846 - 270979 | 39866.5 |
| fad-dependent monooxygenase | RCA23_RS01235 | Not Available | Negative | 270987 - 272174 | 42326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
