Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | RCA23_RS12215 | Not Available | Negative | 2539181 - 2539558 | 12891.5 |
| replication-associated recombination protein a | RCA23_RS12220 | Not Available | Negative | 2539590 - 2540903 | 48455.8 |
| autoinducer binding domain-containing protein | RCA23_RS12225 | Not Available | Negative | 2540970 - 2541581 | 22590.1 |
| 50s ribosomal protein l17 | RCA23_RS12230 | Not Available | Negative | 2541810 - 2542220 | 15609.0 |
| dna-directed rna polymerase subunit alpha | RCA23_RS12235 | Not Available | Negative | 2542336 - 2543352 | 37043.3 |
| 30s ribosomal protein s11 | RCA23_RS12240 | Not Available | Negative | 2543460 - 2543849 | 13754.4 |
| 30s ribosomal protein s13 | RCA23_RS12245 | Not Available | Negative | 2543860 - 2544228 | 13689.7 |
| adenylate kinase | RCA23_RS12250 | Not Available | Negative | 2544407 - 2545048 | 22301.6 |
| preprotein translocase subunit secy | RCA23_RS12255 | Not Available | Negative | 2545045 - 2546403 | 48691.4 |
| 50s ribosomal protein l15 | RCA23_RS12260 | Not Available | Negative | 2546508 - 2546975 | 16039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
