Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS12065 | Not Available | Positive | 2512409 - 2513053 | 23419.6 |
| dna modification methylase | RCA23_RS12070 | Not Available | Positive | 2513221 - 2514510 | 47873.9 |
| duf5681 domain-containing protein | RCA23_RS12075 | Not Available | Positive | 2514507 - 2514890 | 14054.8 |
| phage terminase large subunit | RCA23_RS12080 | Not Available | Positive | 2514868 - 2516313 | 54384.4 |
| duf2924 domain-containing protein | RCA23_RS12085 | Not Available | Positive | 2516428 - 2516823 | 14665.6 |
| recombinase family protein | RCA23_RS12090 | Not Available | Positive | 2516775 - 2518436 | 62789.1 |
| Trna-arg | Not Available | Not Available | Positive | 2518738 - 2518814 | Not Available |
| hamp domain-containing sensor histidine kinase | RCA23_RS12100 | Not Available | Negative | 2518873 - 2520249 | 50184.4 |
| dihydrolipoyl dehydrogenase family protein | RCA23_RS12105 | Not Available | Negative | 2520269 - 2521684 | 49464.1 |
| tvp38/tmem64 family protein | RCA23_RS12110 | Not Available | Negative | 2521687 - 2522418 | 26545.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
