Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | RCA23_RS12015 | Not Available | Negative | 2501835 - 2502686 | 30629.1 |
| sugar abc transporter substrate-binding protein | RCA23_RS12020 | Not Available | Negative | 2502640 - 2503752 | 38598.4 |
| laci family dna-binding transcriptional regulator | RCA23_RS12025 | Not Available | Positive | 2503924 - 2504961 | 37105.2 |
| alpa family phage regulatory protein | RCA23_RS12030 | Not Available | Positive | 2505131 - 2505304 | 6829.37 |
| helix-turn-helix domain-containing protein | RCA23_RS12035 | Not Available | Positive | 2506163 - 2506816 | 24031.8 |
| hypothetical protein | RCA23_RS16305 | Not Available | Negative | 2506977 - 2507165 | 6667.2 |
| class ii glutamine amidotransferase | RCA23_RS12040 | Not Available | Positive | 2507367 - 2508263 | 32713.0 |
| gxgxg domain-containing protein | RCA23_RS12045 | Not Available | Positive | 2508265 - 2508942 | 23685.9 |
| fmn-binding glutamate synthase family protein | RCA23_RS12050 | Not Available | Positive | 2508954 - 2510294 | 47569.8 |
| type iii glutamate--ammonia ligase | RCA23_RS12055 | Not Available | Positive | 2510364 - 2511698 | 48960.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
