Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | RCA23_RS11825 | Not Available | Negative | 2466350 - 2467057 | 28360.1 |
| phage/plasmid primase, p4 family | RCA23_RS11830 | Not Available | Positive | 2467008 - 2467988 | 36378.2 |
| hggxstg domain-containing protein | RCA23_RS11835 | Not Available | Negative | 2468237 - 2468581 | 13180.7 |
| aldo/keto reductase | RCA23_RS11840 | Not Available | Positive | 2468997 - 2470031 | 38339.5 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS11845 | Not Available | Negative | 2470078 - 2470845 | 26595.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | RCA23_RS11850 | Not Available | Negative | 2470855 - 2471994 | 41023.1 |
| fumarylacetoacetate hydrolase family protein | RCA23_RS11855 | Not Available | Negative | 2471987 - 2472826 | 29952.4 |
| c-terminal binding protein | RCA23_RS11860 | Not Available | Negative | 2472823 - 2473812 | 35055.7 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS11865 | Not Available | Negative | 2473809 - 2474558 | 26236.3 |
| l-rhamnose mutarotase | RCA23_RS11870 | Not Available | Negative | 2474555 - 2474872 | 12392.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
