Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | RCA23_RS11770 | Not Available | Negative | 2457718 - 2458323 | 22049.6 |
| duf3306 domain-containing protein | RCA23_RS11775 | Not Available | Negative | 2458320 - 2458949 | 23524.4 |
| duf3305 domain-containing protein | RCA23_RS11780 | Not Available | Negative | 2458946 - 2459476 | 19803.4 |
| 4fe-4s binding protein | RCA23_RS11785 | Not Available | Positive | 2459831 - 2461798 | 69271.2 |
| hypothetical protein | RCA23_RS11790 | Not Available | Negative | 2461792 - 2462517 | 26426.0 |
| duf6494 family protein | RCA23_RS11795 | Not Available | Positive | 2462613 - 2462804 | 6930.37 |
| mrp/nbp35 family atp-binding protein | RCA23_RS11800 | Not Available | Positive | 2462805 - 2463860 | 36610.7 |
| biotin/lipoate--protein ligase family protein | RCA23_RS11805 | Not Available | Positive | 2463857 - 2464570 | 24977.8 |
| duf6505 family protein | RCA23_RS11810 | Not Available | Positive | 2464572 - 2465081 | 18647.6 |
| p27 family phage terminase small subunit | RCA23_RS11820 | Not Available | Negative | 2465644 - 2466057 | 15291.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
