Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | RCA23_RS01140 | Not Available | Positive | 250528 - 250956 | 14729.7 |
| paai family thioesterase | RCA23_RS01145 | Not Available | Positive | 250953 - 251453 | 18559.1 |
| mate family efflux transporter | RCA23_RS01150 | Not Available | Positive | 251446 - 252768 | 46981.8 |
| quinone-dependent dihydroorotate dehydrogenase | RCA23_RS01155 | Not Available | Negative | 252789 - 253850 | 37263.8 |
| duf952 domain-containing protein | RCA23_RS01160 | Not Available | Negative | 253847 - 254185 | 12413.8 |
| yjbh domain-containing protein | RCA23_RS01165 | Not Available | Positive | 254317 - 255892 | 54890.1 |
| peptidoglycan-binding protein | RCA23_RS01170 | Not Available | Negative | 255964 - 257721 | 62274.6 |
| glycine--trna ligase subunit alpha | RCA23_RS01175 | Not Available | Positive | 257885 - 258799 | 34111.5 |
| duf6446 family protein | RCA23_RS01180 | Not Available | Positive | 258799 - 259317 | 18572.6 |
| glycine--trna ligase subunit beta | RCA23_RS01185 | Not Available | Positive | 259317 - 261374 | 74119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
