Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbh domain-containing protein | RCA23_RS11725 | Not Available | Negative | 2447674 - 2448228 | 20777.2 |
| gtp 3',8-cyclase moaa | RCA23_RS11730 | Not Available | Negative | 2448766 - 2449773 | 37842.6 |
| transposase | RCA23_RS16800 | Not Available | Positive | 2450226 - 2450408 | 7177.66 |
| atp-binding cassette domain-containing protein | RCA23_RS11740 | Not Available | Negative | 2450738 - 2451439 | 25109.4 |
| abc transporter permease | RCA23_RS11745 | Not Available | Negative | 2451448 - 2452152 | 25503.0 |
| hypothetical protein | RCA23_RS16885 | Not Available | Negative | 2452183 - 2452311 | 4453.39 |
| formate dehydrogenase subunit gamma | RCA23_RS11750 | Not Available | Negative | 2452395 - 2453771 | 49611.3 |
| formate dehydrogenase fdh3 subunit beta | RCA23_RS11755 | Not Available | Negative | 2453854 - 2454447 | 21156.2 |
| formate dehydrogenase subunit alpha | RCA23_RS11760 | Not Available | Negative | 2454461 - 2457355 | 107210.0 |
| twin-arginine translocation pathway signal protein | RCA23_RS11765 | Not Available | Negative | 2457472 - 2457663 | 6492.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
