Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence-associated e family protein | RCA23_RS16055 | Not Available | Positive | 2439085 - 2440413 | 50078.7 |
| substrate-binding domain-containing protein | RCA23_RS11685 | Not Available | Positive | 2440954 - 2441754 | 28534.9 |
| hypothetical protein | RCA23_RS16880 | Not Available | Positive | 2441796 - 2441930 | 4873.8 |
| is6 family transposase | RCA23_RS11690 | Not Available | Negative | 2442007 - 2442714 | 28298.1 |
| gephyrin-like molybdotransferase glp | RCA23_RS11695 | Not Available | Negative | 2443158 - 2444420 | 43934.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | RCA23_RS11700 | Not Available | Negative | 2444417 - 2444914 | 18233.9 |
| hypothetical protein | RCA23_RS11705 | Not Available | Negative | 2444911 - 2445231 | 11534.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | RCA23_RS11710 | Not Available | Negative | 2445228 - 2446118 | 32466.1 |
| molybdenum cofactor biosynthesis protein moae | RCA23_RS11715 | Not Available | Negative | 2446738 - 2447181 | 16505.7 |
| molybdopterin converting factor subunit 1 | RCA23_RS11720 | Not Available | Negative | 2447185 - 2447430 | 9186.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
