Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nnru family protein | RCA23_RS11620 | Not Available | Positive | 2427117 - 2427665 | 20476.9 |
| hypothetical protein | RCA23_RS11630 | Not Available | Positive | 2428870 - 2429508 | 23272.5 |
| dna modification methylase | RCA23_RS11635 | Not Available | Positive | 2429684 - 2430973 | 48088.1 |
| duf5681 domain-containing protein | RCA23_RS16050 | Not Available | Positive | 2430970 - 2431335 | 13469.3 |
| phage terminase large subunit | RCA23_RS11645 | Not Available | Positive | 2431343 - 2432776 | 53976.0 |
| recombinase family protein | RCA23_RS11655 | Not Available | Positive | 2433283 - 2434899 | 61044.6 |
| tyrosine-type recombinase/integrase | RCA23_RS11660 | Not Available | Positive | 2435361 - 2436626 | 46728.2 |
| hypothetical protein | RCA23_RS11665 | Not Available | Positive | 2436623 - 2437081 | 16674.9 |
| hypothetical protein | RCA23_RS11670 | Not Available | Positive | 2437482 - 2437922 | 16260.2 |
| hypothetical protein | RCA23_RS11675 | Not Available | Positive | 2438036 - 2439085 | 38240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
