Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone pcu(a)c | RCA23_RS11395 | Not Available | Negative | 2385943 - 2386404 | 15945.2 |
| dsba family protein | RCA23_RS11400 | Not Available | Negative | 2386430 - 2387089 | 23540.2 |
| disulfide bond formation protein b | RCA23_RS11405 | Not Available | Negative | 2387086 - 2387511 | 15243.0 |
| sco family protein | RCA23_RS11410 | Not Available | Negative | 2387508 - 2388104 | 21851.8 |
| merr family transcriptional regulator | RCA23_RS11415 | Not Available | Positive | 2388277 - 2388705 | 16194.5 |
| ynfa family protein | RCA23_RS11420 | Not Available | Positive | 2388708 - 2389034 | 11368.0 |
| hypothetical protein | RCA23_RS11425 | Not Available | Positive | 2389105 - 2389329 | 8152.7 |
| hypothetical protein | RCA23_RS11430 | Not Available | Negative | 2389434 - 2390264 | 31121.9 |
| yjbh domain-containing protein | RCA23_RS16270 | Not Available | Positive | 2390901 - 2391017 | 4331.28 |
| is6 family transposase | RCA23_RS11440 | Not Available | Negative | 2391699 - 2392406 | 28309.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
