Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 2370370 - 2370443 | Not Available |
| tyrosine-type recombinase/integrase | RCA23_RS11305 | Not Available | Positive | 2370689 - 2372218 | 57940.7 |
| site-specific integrase | RCA23_RS11310 | Not Available | Negative | 2372215 - 2372781 | 21307.5 |
| sugar phosphate nucleotidyltransferase | RCA23_RS16870 | Not Available | Positive | 2373139 - 2373477 | 12019.7 |
| hypothetical protein | RCA23_RS11320 | Not Available | Positive | 2374194 - 2374397 | 7540.77 |
| hypothetical protein | RCA23_RS11325 | Not Available | Negative | 2374411 - 2375142 | 27674.9 |
| hypothetical protein | RCA23_RS11330 | Not Available | Negative | 2375142 - 2375873 | 28809.7 |
| aaa family atpase | RCA23_RS11335 | Not Available | Negative | 2375873 - 2376553 | 25012.0 |
| hypothetical protein | RCA23_RS11340 | Not Available | Negative | 2376614 - 2377432 | 29894.4 |
| hypothetical protein | RCA23_RS11345 | Not Available | Positive | 2377643 - 2378410 | 29854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
