Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val family dehydrogenase | RCA23_RS11100 | Not Available | Negative | 2330483 - 2331919 | 52492.4 |
| hypothetical protein | RCA23_RS11105 | Not Available | Negative | 2331998 - 2332495 | 18173.6 |
| nad(p)-dependent oxidoreductase | RCA23_RS11110 | Not Available | Negative | 2332585 - 2333529 | 33480.4 |
| reductive dehalogenase | RCA23_RS11115 | Not Available | Positive | 2333637 - 2334782 | 42372.6 |
| pirin family protein | RCA23_RS11120 | Not Available | Positive | 2334839 - 2335750 | 33430.7 |
| tetr/acrr family transcriptional regulator | RCA23_RS11125 | Not Available | Negative | 2335734 - 2336333 | 22475.1 |
| hypothetical protein | RCA23_RS11130 | Not Available | Positive | 2336413 - 2336667 | 8829.34 |
| homoserine dehydrogenase | RCA23_RS11135 | Not Available | Positive | 2336787 - 2338076 | 44344.7 |
| class ii fructose-bisphosphatase | RCA23_RS11140 | Not Available | Positive | 2338209 - 2339174 | 33934.1 |
| single-stranded-dna-specific exonuclease recj | RCA23_RS11145 | Not Available | Positive | 2339176 - 2340912 | 60578.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
