Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha family protein | RCA23_RS11055 | Not Available | Negative | 2320101 - 2323037 | 105275.0 |
| sarcosine oxidase subunit delta | RCA23_RS11060 | Not Available | Negative | 2323034 - 2323297 | 9810.45 |
| sarcosine oxidase subunit beta family protein | RCA23_RS11065 | Not Available | Negative | 2323358 - 2324611 | 45471.6 |
| phosphatidylserine decarboxylase | RCA23_RS11070 | Not Available | Negative | 2324724 - 2325416 | 25144.9 |
| diacylglycerol kinase | RCA23_RS11075 | Not Available | Negative | 2325421 - 2325810 | 14030.5 |
| phosphoethanolamine transferase | RCA23_RS11080 | Not Available | Negative | 2325807 - 2327417 | 59278.5 |
| cdp-alcohol phosphatidyltransferase family protein | RCA23_RS11085 | Not Available | Negative | 2327421 - 2328164 | 26528.2 |
| phosphatase pap2 family protein | RCA23_RS11090 | Not Available | Negative | 2328254 - 2328784 | 19645.6 |
| yjbh domain-containing protein | RCA23_RS16040 | Not Available | Negative | 2328897 - 2329601 | 25512.9 |
| phosphoethanolamine transferase domain-containing protein | RCA23_RS16045 | Not Available | Negative | 2329541 - 2330398 | 32231.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
