Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02186 family protein | RCA23_RS10905 | Not Available | Negative | 2287342 - 2288109 | 27898.6 |
| sulfite exporter taue/safe family protein | RCA23_RS10910 | Not Available | Negative | 2288109 - 2289026 | 31923.2 |
| abc transporter permease | RCA23_RS10915 | Not Available | Negative | 2289135 - 2290274 | 39557.6 |
| abc transporter permease | RCA23_RS10920 | Not Available | Negative | 2290279 - 2291340 | 37824.9 |
| abc transporter atp-binding protein | RCA23_RS10925 | Not Available | Negative | 2291381 - 2292916 | 55148.6 |
| bmp family protein | RCA23_RS10930 | Not Available | Negative | 2292992 - 2293990 | 34382.5 |
| gnat family n-acetyltransferase | RCA23_RS10935 | Not Available | Negative | 2294177 - 2294608 | 15665.1 |
| nifu family protein | RCA23_RS10940 | Not Available | Negative | 2294598 - 2295161 | 19887.8 |
| universal stress protein | RCA23_RS10945 | Not Available | Negative | 2295250 - 2295705 | 16792.3 |
| tryptophan--trna ligase | RCA23_RS10950 | Not Available | Negative | 2295862 - 2296878 | 37397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
