Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family metallopeptidase | RCA23_RS10860 | Not Available | Negative | 2277986 - 2279995 | 73862.6 |
| hesa/moeb/thif family protein | RCA23_RS10865 | Not Available | Negative | 2279997 - 2281046 | 36956.0 |
| dutp diphosphatase | RCA23_RS10870 | Not Available | Negative | 2281043 - 2281486 | 15199.1 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | RCA23_RS10875 | Not Available | Negative | 2281501 - 2282691 | 42083.9 |
| rna polymerase factor sigma-32 | RCA23_RS10880 | Not Available | Negative | 2282748 - 2283626 | 33516.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | RCA23_RS10885 | Not Available | Positive | 2283716 - 2284249 | 18953.9 |
| histidine phosphatase family protein | RCA23_RS10890 | Not Available | Positive | 2284246 - 2284818 | 21389.0 |
| glutathione s-transferase n-terminal domain-containing protein | RCA23_RS16915 | Not Available | Positive | 2284882 - 2285307 | 15854.1 |
| hypothetical protein | RCA23_RS16920 | Not Available | Positive | 2285323 - 2285757 | 16106.0 |
| yjbh domain-containing protein | RCA23_RS10900 | Not Available | Positive | 2285829 - 2287321 | 53274.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
