Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | RCA23_RS10710 | Not Available | Positive | 2237568 - 2238365 | 28375.5 |
| atp-dependent clp protease atp-binding subunit clpa | RCA23_RS10715 | Not Available | Positive | 2238504 - 2240834 | 85102.2 |
| peptidoglycan -binding protein | RCA23_RS10720 | Not Available | Negative | 2240878 - 2243121 | 82082.9 |
| hypothetical protein | RCA23_RS10725 | Not Available | Negative | 2243131 - 2244303 | 42362.0 |
| gamma-glutamylcyclotransferase | RCA23_RS10730 | Not Available | Negative | 2244371 - 2244901 | 19910.7 |
| pentapeptide repeat-containing protein | RCA23_RS16030 | Not Available | Positive | 2245628 - 2246512 | 33668.1 |
| prephenate/arogenate dehydrogenase family protein | RCA23_RS10740 | Not Available | Negative | 2246560 - 2247465 | 32614.9 |
| histidinol-phosphate transaminase | RCA23_RS10745 | Not Available | Negative | 2247462 - 2248547 | 38675.2 |
| 30s ribosomal protein s4 | RCA23_RS10750 | Not Available | Negative | 2248746 - 2249366 | 23578.4 |
| dead/deah box helicase | RCA23_RS10755 | Not Available | Negative | 2249745 - 2251712 | 70529.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
