Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine aldolase family protein | RCA23_RS10660 | Not Available | Positive | 2228409 - 2229458 | 37746.7 |
| dsba family protein | RCA23_RS10665 | Not Available | Negative | 2229510 - 2230109 | 21788.9 |
| ribose-phosphate pyrophosphokinase | RCA23_RS10670 | Not Available | Positive | 2230217 - 2231236 | 37003.6 |
| h-type lectin domain-containing protein | RCA23_RS10675 | Not Available | Negative | 2231247 - 2231597 | 12977.1 |
| f0f1 atp synthase subunit epsilon | RCA23_RS10680 | Not Available | Negative | 2231688 - 2232095 | 13650.0 |
| f0f1 atp synthase subunit beta | RCA23_RS10685 | Not Available | Negative | 2232095 - 2233519 | 50291.2 |
| f0f1 atp synthase subunit gamma | RCA23_RS10690 | Not Available | Negative | 2233536 - 2234405 | 31095.4 |
| f0f1 atp synthase subunit alpha | RCA23_RS10695 | Not Available | Negative | 2234418 - 2235953 | 54657.5 |
| f0f1 atp synthase subunit delta | RCA23_RS10700 | Not Available | Negative | 2235954 - 2236514 | 19834.5 |
| class i sam-dependent methyltransferase | RCA23_RS10705 | Not Available | Negative | 2236745 - 2237506 | 28373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
