Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transferrin-binding protein-like solute binding protein | RCA23_RS10610 | Not Available | Positive | 2219597 - 2220529 | 32393.2 |
| transferrin-binding protein-like solute binding protein | RCA23_RS10615 | Not Available | Positive | 2220590 - 2221510 | 32062.3 |
| m24 family metallopeptidase | RCA23_RS10620 | Not Available | Positive | 2221605 - 2222753 | 41537.5 |
| transferrin-binding protein-like solute binding protein | RCA23_RS10625 | Not Available | Positive | 2222874 - 2223821 | 31948.9 |
| duf2161 domain-containing phosphodiesterase | RCA23_RS10630 | Not Available | Negative | 2223837 - 2224490 | 23957.2 |
| manganese-dependent inorganic pyrophosphatase | RCA23_RS10635 | Not Available | Positive | 2224597 - 2225517 | 32759.5 |
| tigr01459 family had-type hydrolase | RCA23_RS10640 | Not Available | Positive | 2225535 - 2226407 | 31601.0 |
| maoc family dehydratase | RCA23_RS10645 | Not Available | Positive | 2226492 - 2226935 | 16134.5 |
| bifunctional riboflavin kinase/fad synthetase | RCA23_RS10650 | Not Available | Positive | 2226997 - 2227944 | 34228.8 |
| ycgn family cysteine cluster protein | RCA23_RS10655 | Not Available | Positive | 2227941 - 2228405 | 17653.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
