Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional sulfate adenylyltransferase/adenylylsulfate kinase | RCA23_RS10560 | Not Available | Positive | 2210930 - 2212633 | 63196.4 |
| duf1150 family protein | RCA23_RS10565 | Not Available | Negative | 2212808 - 2213026 | 8357.84 |
| hsp20 family protein | RCA23_RS10570 | Not Available | Negative | 2213028 - 2213444 | 15408.5 |
| ydch family protein | RCA23_RS10575 | Not Available | Positive | 2213600 - 2213815 | 8011.84 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | RCA23_RS10580 | Not Available | Positive | 2213872 - 2214354 | 16607.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | RCA23_RS10585 | Not Available | Positive | 2214347 - 2215408 | 37887.3 |
| alpha/beta fold hydrolase | RCA23_RS10590 | Not Available | Negative | 2215438 - 2216205 | 27590.7 |
| chaperonin groel | RCA23_RS10595 | Not Available | Negative | 2216314 - 2217963 | 57402.2 |
| co-chaperone groes | RCA23_RS10600 | Not Available | Negative | 2218015 - 2218302 | 10048.0 |
| transferrin-binding protein-like solute binding protein | RCA23_RS10605 | Not Available | Positive | 2218533 - 2219483 | 32752.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
