Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-acp reductase | RCA23_RS10310 | Not Available | Positive | 2158901 - 2159689 | 27843.3 |
| threonine/serine dehydratase | RCA23_RS10315 | Not Available | Negative | 2159738 - 2160715 | 34205.1 |
| haloacid dehalogenase type ii | RCA23_RS10320 | Not Available | Negative | 2160719 - 2161402 | 24501.9 |
| 3-oxoadipate enol-lactonase | RCA23_RS10325 | Not Available | Positive | 2161460 - 2162248 | 28392.5 |
| tcr/tet family mfs transporter | RCA23_RS10330 | Not Available | Positive | 2162268 - 2163494 | 43602.4 |
| alcohol dehydrogenase catalytic domain-containing protein | RCA23_RS10335 | Not Available | Positive | 2163564 - 2164649 | 36853.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | RCA23_RS10340 | Not Available | Positive | 2164704 - 2165945 | 44921.4 |
| fad-dependent oxidoreductase | RCA23_RS10345 | Not Available | Negative | 2165986 - 2168433 | 90046.9 |
| trimethylamine methyltransferase family protein | RCA23_RS10350 | Not Available | Negative | 2168488 - 2170020 | 55668.7 |
| rhodanese-like domain-containing protein | RCA23_RS10355 | Not Available | Positive | 2170193 - 2170597 | 14659.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
