Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | RCA23_RS00995 | Not Available | Negative | 217544 - 218824 | 45574.3 |
| nad kinase | RCA23_RS01000 | Not Available | Positive | 218982 - 219755 | 27782.4 |
| hypothetical protein | RCA23_RS16350 | Not Available | Negative | 219804 - 219959 | 4858.97 |
| amp-binding protein | RCA23_RS01005 | Not Available | Negative | 220145 - 222034 | 67848.2 |
| cupin domain-containing protein | RCA23_RS01010 | Not Available | Positive | 222198 - 223292 | 40204.5 |
| cytidine deaminase | RCA23_RS01015 | Not Available | Positive | 223393 - 223809 | 14015.7 |
| thymidine phosphorylase | RCA23_RS01020 | Not Available | Positive | 223809 - 225131 | 45658.3 |
| phosphopentomutase | RCA23_RS01025 | Not Available | Positive | 225124 - 226296 | 42220.1 |
| adenosine deaminase | RCA23_RS01030 | Not Available | Positive | 226293 - 227261 | 35155.1 |
| uracil phosphoribosyltransferase | RCA23_RS01035 | Not Available | Positive | 227588 - 228214 | 22767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
