Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | RCA23_RS10260 | Not Available | Negative | 2149042 - 2150223 | 42612.1 |
| apolipoprotein n-acyltransferase | RCA23_RS10265 | Not Available | Negative | 2150271 - 2151767 | 54075.9 |
| hemolysin family protein | RCA23_RS10270 | Not Available | Negative | 2151742 - 2152629 | 32668.1 |
| rrna maturation rnase ybey | RCA23_RS10275 | Not Available | Negative | 2152638 - 2153141 | 18002.3 |
| phoh family protein | RCA23_RS10280 | Not Available | Negative | 2153138 - 2154136 | 36296.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | RCA23_RS10285 | Not Available | Negative | 2154233 - 2155564 | 48986.8 |
| hypothetical protein | RCA23_RS10290 | Not Available | Positive | 2155680 - 2156543 | 33160.3 |
| fur family transcriptional regulator irr | RCA23_RS10295 | Not Available | Negative | 2156552 - 2156986 | 16135.1 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | RCA23_RS10300 | Not Available | Positive | 2157143 - 2157652 | 18742.8 |
| beta-ketoacyl-acp synthase i | RCA23_RS10305 | Not Available | Positive | 2157667 - 2158896 | 43172.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
