Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RCA23_RS10160 | Not Available | Negative | 2128931 - 2130139 | 44255.4 |
| alpha-hydroxy acid oxidase | RCA23_RS10165 | Not Available | Positive | 2130289 - 2131452 | 42382.4 |
| bcct family transporter | RCA23_RS10170 | Not Available | Negative | 2131542 - 2133377 | 64964.5 |
| mfs transporter | RCA23_RS10175 | Not Available | Negative | 2133696 - 2134841 | 39827.1 |
| 50s ribosomal protein l25/general stress protein ctc | RCA23_RS10180 | Not Available | Positive | 2134970 - 2135605 | 22739.3 |
| aminoacyl-trna hydrolase | RCA23_RS10185 | Not Available | Positive | 2135732 - 2136418 | 24322.4 |
| duf2332 domain-containing protein | RCA23_RS10190 | Not Available | Positive | 2136415 - 2137437 | 37642.1 |
| duf2237 family protein | RCA23_RS10195 | Not Available | Positive | 2137439 - 2137810 | 13349.0 |
| tryptophan synthase subunit beta | RCA23_RS10200 | Not Available | Negative | 2137836 - 2139068 | 44400.3 |
| phosphoribosylanthranilate isomerase | RCA23_RS10205 | Not Available | Negative | 2139151 - 2139789 | 21993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
