Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response dexh box helicase | RCA23_RS10060 | Not Available | Negative | 2108931 - 2111360 | 88998.8 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | RCA23_RS10065 | Not Available | Negative | 2111400 - 2112302 | 31358.3 |
| formate--tetrahydrofolate ligase | RCA23_RS10070 | Not Available | Negative | 2112388 - 2114064 | 59685.1 |
| mosc domain-containing protein | RCA23_RS10075 | Not Available | Negative | 2114357 - 2114959 | 22373.8 |
| atp-dependent zinc metalloprotease ftsh | RCA23_RS10080 | Not Available | Negative | 2115018 - 2116937 | 68660.1 |
| trna lysidine(34) synthetase tils | RCA23_RS10085 | Not Available | Negative | 2117031 - 2118254 | 44603.9 |
| tetratricopeptide repeat protein | RCA23_RS10090 | Not Available | Negative | 2118251 - 2119039 | 28173.6 |
| peptidoglycan-associated lipoprotein pal | RCA23_RS10095 | Not Available | Negative | 2119039 - 2119548 | 18533.7 |
| tol-pal system beta propeller repeat protein tolb | RCA23_RS10100 | Not Available | Negative | 2119594 - 2120916 | 48269.5 |
| hypothetical protein | RCA23_RS16025 | Not Available | Negative | 2120913 - 2122049 | 39814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
