Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | RCA23_RS09860 | Not Available | Positive | 2068328 - 2068789 | 17065.5 |
| duf1178 family protein | RCA23_RS09865 | Not Available | Positive | 2068866 - 2069288 | 15431.3 |
| aspartate kinase | RCA23_RS09870 | Not Available | Positive | 2069373 - 2070611 | 44541.2 |
| phosphoenolpyruvate--protein phosphotransferase | RCA23_RS09875 | Not Available | Positive | 2070626 - 2072872 | 82340.2 |
| gnat family n-acetyltransferase | RCA23_RS09880 | Not Available | Negative | 2073008 - 2073508 | 18135.9 |
| flavin reductase family protein | RCA23_RS09885 | Not Available | Positive | 2073581 - 2074186 | 21673.6 |
| sulp family inorganic anion transporter | RCA23_RS09890 | Not Available | Negative | 2074217 - 2075848 | 56962.1 |
| s-methyl-5'-thioadenosine phosphorylase | RCA23_RS09895 | Not Available | Positive | 2076031 - 2076906 | 31265.3 |
| adenine phosphoribosyltransferase | RCA23_RS09900 | Not Available | Positive | 2076993 - 2077523 | 18982.3 |
| gnat family n-acetyltransferase | RCA23_RS09905 | Not Available | Negative | 2077520 - 2078104 | 22148.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
