Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2060699 - 2061068 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | RCA23_RS09815 | Not Available | Negative | 2061328 - 2062005 | 24404.8 |
| hypothetical protein | RCA23_RS09820 | Not Available | Negative | 2062017 - 2062544 | 18989.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | RCA23_RS09825 | Not Available | Negative | 2062591 - 2064075 | 52307.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | RCA23_RS09830 | Not Available | Negative | 2064075 - 2064362 | 10392.3 |
| nucleoside deaminase | RCA23_RS09835 | Not Available | Negative | 2064449 - 2064901 | 15741.8 |
| pseudouridine synthase | RCA23_RS09840 | Not Available | Positive | 2064947 - 2065729 | 29428.6 |
| molybdenum abc transporter atp-binding protein | RCA23_RS09845 | Not Available | Negative | 2065744 - 2066811 | 37857.4 |
| molybdate abc transporter permease subunit | RCA23_RS09850 | Not Available | Negative | 2066808 - 2067494 | 23655.9 |
| molybdate abc transporter substrate-binding protein | RCA23_RS09855 | Not Available | Negative | 2067491 - 2068234 | 25474.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
